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	<title>Comments on: Wahl and Amman</title>
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	<link>http://climateaudit.org/2005/05/12/wahl-and-amman/</link>
	<description>by Steve McIntyre</description>
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		<title>By: ClimateGate silliness at catallaxyfiles</title>
		<link>http://climateaudit.org/2005/05/12/wahl-and-amman/#comment-33592</link>
		<dc:creator><![CDATA[ClimateGate silliness at catallaxyfiles]]></dc:creator>
		<pubDate>Tue, 24 Nov 2009 10:17:01 +0000</pubDate>
		<guid isPermaLink="false">/?p=204#comment-33592</guid>
		<description><![CDATA[[...] to Steve McIntyre&#8217;s Climate Audit blog two papers were written and sent out for publication. These papers were somewhat controversial [...]]]></description>
		<content:encoded><![CDATA[<p>[...] to Steve McIntyre&#8217;s Climate Audit blog two papers were written and sent out for publication. These papers were somewhat controversial [...]</p>
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		<title>By: TCO</title>
		<link>http://climateaudit.org/2005/05/12/wahl-and-amman/#comment-33591</link>
		<dc:creator><![CDATA[TCO]]></dc:creator>
		<pubDate>Mon, 19 Sep 2005 02:22:09 +0000</pubDate>
		<guid isPermaLink="false">/?p=204#comment-33591</guid>
		<description><![CDATA[Yeah...it&#039;s hilarious and shows the low level of ascientific tendentiousness that they stoop to, that they criticize the statistics of &quot;your reconstruction&quot;, when what you are showing is that their reconstruction is NOT ROBUST.

The more and more of this that goes on, the more I think that the failed physicist is not that much of a scientist, but more of a promoter.]]></description>
		<content:encoded><![CDATA[<p>Yeah&#8230;it&#8217;s hilarious and shows the low level of ascientific tendentiousness that they stoop to, that they criticize the statistics of &#8220;your reconstruction&#8221;, when what you are showing is that their reconstruction is NOT ROBUST.</p>
<p>The more and more of this that goes on, the more I think that the failed physicist is not that much of a scientist, but more of a promoter.</p>
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		<title>By: Michael Jankowski</title>
		<link>http://climateaudit.org/2005/05/12/wahl-and-amman/#comment-33590</link>
		<dc:creator><![CDATA[Michael Jankowski]]></dc:creator>
		<pubDate>Fri, 13 May 2005 14:46:56 +0000</pubDate>
		<guid isPermaLink="false">/?p=204#comment-33590</guid>
		<description><![CDATA[My first reaction was that it seems like many of the things I&#039;ve seen on Ammann&#039;s website are re-hashes (for example, getting Mann&#039;s results without using PCs at all).

I also didn&#039;t appreciate the hard-to-discern spaghetti graphs.

The one thing that struck me the most was the noteworthiness applied to the fact that M&amp;M&#039;s 15th century results didn&#039;t pass statistical validity tests.  It seems to me that this was already known www.uoguelph.ca/~rmckitri/research/trc.html &quot;...In our E&amp;E article we showed that the MBH98 reconstruction has high early 15th century values, as shown in the Figure below, after applying two changes: (1) using the archived version of the Gaspé tree ring series rather than the version with ad hoc editing by Mann et al.; (2) using exactly the same number of series as MBH98, but with standard centered PC calculations rather than the data mining method of MBH98. However, neither reconstruction has any statistical significance...&quot;   The inclusion of this item reads like propoganda to tell people that M&amp;M are wrong and MBH98 is right about the 15th century, when in fact MBH98 had the same statistical problem.]]></description>
		<content:encoded><![CDATA[<p>My first reaction was that it seems like many of the things I&#8217;ve seen on Ammann&#8217;s website are re-hashes (for example, getting Mann&#8217;s results without using PCs at all).</p>
<p>I also didn&#8217;t appreciate the hard-to-discern spaghetti graphs.</p>
<p>The one thing that struck me the most was the noteworthiness applied to the fact that M&amp;M&#8217;s 15th century results didn&#8217;t pass statistical validity tests.  It seems to me that this was already known <a href="http://www.uoguelph.ca/~rmckitri/research/trc.html" rel="nofollow">http://www.uoguelph.ca/~rmckitri/research/trc.html</a> &#8220;&#8230;In our E&amp;E article we showed that the MBH98 reconstruction has high early 15th century values, as shown in the Figure below, after applying two changes: (1) using the archived version of the Gaspé tree ring series rather than the version with ad hoc editing by Mann et al.; (2) using exactly the same number of series as MBH98, but with standard centered PC calculations rather than the data mining method of MBH98. However, neither reconstruction has any statistical significance&#8230;&#8221;   The inclusion of this item reads like propoganda to tell people that M&amp;M are wrong and MBH98 is right about the 15th century, when in fact MBH98 had the same statistical problem.</p>
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		<title>By: Spence_UK</title>
		<link>http://climateaudit.org/2005/05/12/wahl-and-amman/#comment-33589</link>
		<dc:creator><![CDATA[Spence_UK]]></dc:creator>
		<pubDate>Fri, 13 May 2005 11:39:34 +0000</pubDate>
		<guid isPermaLink="false">/?p=204#comment-33589</guid>
		<description><![CDATA[Steve,

I did try to take a &quot;red team&quot; position on the R-squared question, trying to come up with a reason why it could be ignored, but it is difficult to do so.  R-squared can be viewed as a form of &quot;variance explained&quot; and can be seen as a very similar metric to the eigenvalues generated by the PCA - &lt;i&gt;but&lt;/i&gt;, critically, the eigenvalues from the PCA respond to an offset mean (such as that caused by the decentred PCA method used by Mann), and are therefore not a pure measure of variance explained in this case.  To this end, the R-squared value should be a better representation of variance explained than the PCA eigenvalues.  I don&#039;t see how you could ever justify a claim that the eigenvalues are meaningful but the R-squared value isn&#039;t.

Looking closely at the words, in many ways their paper simply confirms the dependency on the Mann method on the bristlecone pines.  Looking through their scenarios (a)-(d), with the BCP you get a &quot;significant&quot; response without them you do not - although they try to word the paper such that it appears this is caused by the standardisation procedure.  They do not separate out this aspect (which would have been trivial to do) so what they have published on the web is inconclusive on this point (we will have to wait and see what the paper says I guess).  They then try to twist the argument with a straw man, claiming that the low verification stats achieved by your paper is somehow a reflection on your work, rather than a weakness of the MBH methodology.  Quite sly, although we know the hockey team do have a certain panache when it comes to spinning out a good story.  It is just a shame they seem to prefer &quot;fiction&quot;.

Spence.]]></description>
		<content:encoded><![CDATA[<p>Steve,</p>
<p>I did try to take a &#8220;red team&#8221; position on the R-squared question, trying to come up with a reason why it could be ignored, but it is difficult to do so.  R-squared can be viewed as a form of &#8220;variance explained&#8221; and can be seen as a very similar metric to the eigenvalues generated by the PCA &#8211; <i>but</i>, critically, the eigenvalues from the PCA respond to an offset mean (such as that caused by the decentred PCA method used by Mann), and are therefore not a pure measure of variance explained in this case.  To this end, the R-squared value should be a better representation of variance explained than the PCA eigenvalues.  I don&#8217;t see how you could ever justify a claim that the eigenvalues are meaningful but the R-squared value isn&#8217;t.</p>
<p>Looking closely at the words, in many ways their paper simply confirms the dependency on the Mann method on the bristlecone pines.  Looking through their scenarios (a)-(d), with the BCP you get a &#8220;significant&#8221; response without them you do not &#8211; although they try to word the paper such that it appears this is caused by the standardisation procedure.  They do not separate out this aspect (which would have been trivial to do) so what they have published on the web is inconclusive on this point (we will have to wait and see what the paper says I guess).  They then try to twist the argument with a straw man, claiming that the low verification stats achieved by your paper is somehow a reflection on your work, rather than a weakness of the MBH methodology.  Quite sly, although we know the hockey team do have a certain panache when it comes to spinning out a good story.  It is just a shame they seem to prefer &#8220;fiction&#8221;.</p>
<p>Spence.</p>
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		<title>By: Paul Gosling</title>
		<link>http://climateaudit.org/2005/05/12/wahl-and-amman/#comment-33588</link>
		<dc:creator><![CDATA[Paul Gosling]]></dc:creator>
		<pubDate>Fri, 13 May 2005 09:43:12 +0000</pubDate>
		<guid isPermaLink="false">/?p=204#comment-33588</guid>
		<description><![CDATA[So am I right in assuming that this paper one agian relies heavily on the bristlecone pine data, which shows no correlation to local temperatures in the instrument record.]]></description>
		<content:encoded><![CDATA[<p>So am I right in assuming that this paper one agian relies heavily on the bristlecone pine data, which shows no correlation to local temperatures in the instrument record.</p>
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		<title>By: Steve McIntyre</title>
		<link>http://climateaudit.org/2005/05/12/wahl-and-amman/#comment-33587</link>
		<dc:creator><![CDATA[Steve McIntyre]]></dc:creator>
		<pubDate>Fri, 13 May 2005 01:32:46 +0000</pubDate>
		<guid isPermaLink="false">/?p=204#comment-33587</guid>
		<description><![CDATA[Spence, I&#039;ve been working through the code, which changes this quite a bit from usual Hockey Team situations.  They don&#039;t report the R2 anywhere and it isn&#039;t even calculated in the code as far as I can tell.  I&#039;ll calculate the R2 for the AD1400 step tomorrow.  The argument appears to be: they claim a higher RE with the bristlecones in than with the bristlecones out without any other justification.

Their whole posture on &quot;robustness&quot; seems very evasive to me. Mann et al. warranted that their reconstruction was robsut to the presence/absence of dendroclimatic indicators (even though they knew from the CENSORED bristlecone pine sensitivity study that it wasn&#039;t).  The warranted robustness was one of the reasons for the wide acceptance of MBH. Now everything in W-A merely confirms that their reconstruction is sensitive to the presence/absence of bristlecones.

I&#039;ll bet dollars to doughnuts that the W-A 15th century reconstruction fails the R2 test or else they would have reported it.  Spence: do you agree with this: if a process supposedly has a true correlation with temperature of (0.5, 0.4, 0.3 almost anything you name), then the probability of yielding an R2 of ~0 in a 48 year verification test is going to be vanishingly small. Indicatively the lowest true correlation that I can get that is consistent with a R2 of 0 is about 0.05. At this R2, there is no meaningful confidence interval that can be estimated.

If a process fails an R2 test, then the hypothesis that it has a correlation to temperature is falsified. AS to why it has a spurious RE statistic, that is only of forensic interest. Steve]]></description>
		<content:encoded><![CDATA[<p>Spence, I&#8217;ve been working through the code, which changes this quite a bit from usual Hockey Team situations.  They don&#8217;t report the R2 anywhere and it isn&#8217;t even calculated in the code as far as I can tell.  I&#8217;ll calculate the R2 for the AD1400 step tomorrow.  The argument appears to be: they claim a higher RE with the bristlecones in than with the bristlecones out without any other justification.</p>
<p>Their whole posture on &#8220;robustness&#8221; seems very evasive to me. Mann et al. warranted that their reconstruction was robsut to the presence/absence of dendroclimatic indicators (even though they knew from the CENSORED bristlecone pine sensitivity study that it wasn&#8217;t).  The warranted robustness was one of the reasons for the wide acceptance of MBH. Now everything in W-A merely confirms that their reconstruction is sensitive to the presence/absence of bristlecones.</p>
<p>I&#8217;ll bet dollars to doughnuts that the W-A 15th century reconstruction fails the R2 test or else they would have reported it.  Spence: do you agree with this: if a process supposedly has a true correlation with temperature of (0.5, 0.4, 0.3 almost anything you name), then the probability of yielding an R2 of ~0 in a 48 year verification test is going to be vanishingly small. Indicatively the lowest true correlation that I can get that is consistent with a R2 of 0 is about 0.05. At this R2, there is no meaningful confidence interval that can be estimated.</p>
<p>If a process fails an R2 test, then the hypothesis that it has a correlation to temperature is falsified. AS to why it has a spurious RE statistic, that is only of forensic interest. Steve</p>
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		<title>By: Spence_UK</title>
		<link>http://climateaudit.org/2005/05/12/wahl-and-amman/#comment-33586</link>
		<dc:creator><![CDATA[Spence_UK]]></dc:creator>
		<pubDate>Thu, 12 May 2005 22:31:29 +0000</pubDate>
		<guid isPermaLink="false">/?p=204#comment-33586</guid>
		<description><![CDATA[I was originally optimistic that the source code might reveal clues as to the method applied by Mann (quirks and all) but having briefly scanned the code it looks to me like all the important decision steps are missing and the code only performs the last stage - for example, the PC&#039;s to use etc. appear to be hard-coded into the control data file.

It would be interesting to see the paper, I bet they don&#039;t mention R-squared anywhere!  So their spurious RE statistics remain as meaningless as ever.  Plus they point out that the high 15th C. carries no significance, which makes it appear as if that was once claimed, which of course it never was...

Seems the hockey team won&#039;t let the thing die a natural death, they are determined to prolong the agony.  I notice on realclimate they are maintaining the line that other studies make this one irrelevant (so why defend bad science so vehemently?) and that there are still very few graphics showing the Mann curve without the instrumental record overlaid...]]></description>
		<content:encoded><![CDATA[<p>I was originally optimistic that the source code might reveal clues as to the method applied by Mann (quirks and all) but having briefly scanned the code it looks to me like all the important decision steps are missing and the code only performs the last stage &#8211; for example, the PC&#8217;s to use etc. appear to be hard-coded into the control data file.</p>
<p>It would be interesting to see the paper, I bet they don&#8217;t mention R-squared anywhere!  So their spurious RE statistics remain as meaningless as ever.  Plus they point out that the high 15th C. carries no significance, which makes it appear as if that was once claimed, which of course it never was&#8230;</p>
<p>Seems the hockey team won&#8217;t let the thing die a natural death, they are determined to prolong the agony.  I notice on realclimate they are maintaining the line that other studies make this one irrelevant (so why defend bad science so vehemently?) and that there are still very few graphics showing the Mann curve without the instrumental record overlaid&#8230;</p>
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