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	<title>Comments on: Mann 2008 &#8211; Replication II</title>
	<atom:link href="http://climateaudit.org/2009/03/18/mann-2008-replication-ii/feed/" rel="self" type="application/rss+xml" />
	<link>http://climateaudit.org/2009/03/18/mann-2008-replication-ii/</link>
	<description>by Steve McIntyre</description>
	<lastBuildDate>Fri, 24 May 2013 23:32:21 +0000</lastBuildDate>
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	<item>
		<title>By: Notes on RegEM &#171; Climate Audit</title>
		<link>http://climateaudit.org/2009/03/18/mann-2008-replication-ii/#comment-306802</link>
		<dc:creator><![CDATA[Notes on RegEM &#171; Climate Audit]]></dc:creator>
		<pubDate>Mon, 17 Oct 2011 03:08:32 +0000</pubDate>
		<guid isPermaLink="false">http://www.climateaudit.org/?p=5503#comment-306802</guid>
		<description><![CDATA[[...] a period with some interesting properties previously observed some time ago by Jean S and UC here here, but not explained at the [...]]]></description>
		<content:encoded><![CDATA[<p>[...] a period with some interesting properties previously observed some time ago by Jean S and UC here here, but not explained at the [...]</p>
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		<title>By: UC</title>
		<link>http://climateaudit.org/2009/03/18/mann-2008-replication-ii/#comment-179511</link>
		<dc:creator><![CDATA[UC]]></dc:creator>
		<pubDate>Fri, 20 Mar 2009 17:39:38 +0000</pubDate>
		<guid isPermaLink="false">http://www.climateaudit.org/?p=5503#comment-179511</guid>
		<description><![CDATA[I guess Steve will be soon around, so I can email him the zip-files to upload. But for now I uploaded the steps we found most bizarre:

&lt;a href=&quot;http://www.climateaudit.org/wp-content/uploads/2009/03/ihadnh.txt&quot; rel=&quot;nofollow&quot;&gt;Target temperature&lt;/a&gt;

&lt;a href=&quot;http://www.climateaudit.org/wp-content/uploads/2009/03/ad500proxy.txt&quot; rel=&quot;nofollow&quot;&gt;AD500 proxies&lt;/a&gt;, in the following order


&lt;blockquote&gt;nv512
tiljander_2003_darksum
tiljander_2003_lightsum
tiljander_2003_thicknessmm
tiljander_2003_xraydenseave
tornetrask
tan_2003_recontemp
curtis_1996_d13cpyro
curtis_1996_d18o
burns_2003_socotrad13c
burns_2003_socotrad18o
dongge

&lt;/blockquote&gt;
 &lt;a href=&quot;http://www.climateaudit.org/wp-content/uploads/2009/03/ad500recon.txt&quot; rel=&quot;nofollow&quot;&gt;AD500 reconstruction&lt;/a&gt;

---

&lt;a href=&quot;http://www.climateaudit.org/wp-content/uploads/2009/03/ad600proxy.txt&quot; rel=&quot;nofollow&quot;&gt;AD600 proxies&lt;/a&gt;, in the following order

&lt;blockquote&gt;
fisher_1996_cgreenland
nv512
tiljander_2003_darksum
tiljander_2003_lightsum
tiljander_2003_thicknessmm
tiljander_2003_xraydenseave
tornetrask
tan_2003_recontemp
curtis_1996_d13cpyro
curtis_1996_d18o
burns_2003_socotrad13c
burns_2003_socotrad18o
dongge

&lt;/blockquote&gt;
 &lt;a href=&quot;http://www.climateaudit.org/wp-content/uploads/2009/03/ad600recon.txt&quot; rel=&quot;nofollow&quot;&gt;AD600 reconstruction&lt;/a&gt;

Proxies and reconstructions are as regreclow.m writes them.]]></description>
		<content:encoded><![CDATA[<p>I guess Steve will be soon around, so I can email him the zip-files to upload. But for now I uploaded the steps we found most bizarre:</p>
<p><a href="http://www.climateaudit.org/wp-content/uploads/2009/03/ihadnh.txt" rel="nofollow">Target temperature</a></p>
<p><a href="http://www.climateaudit.org/wp-content/uploads/2009/03/ad500proxy.txt" rel="nofollow">AD500 proxies</a>, in the following order</p>
<blockquote><p>nv512<br />
tiljander_2003_darksum<br />
tiljander_2003_lightsum<br />
tiljander_2003_thicknessmm<br />
tiljander_2003_xraydenseave<br />
tornetrask<br />
tan_2003_recontemp<br />
curtis_1996_d13cpyro<br />
curtis_1996_d18o<br />
burns_2003_socotrad13c<br />
burns_2003_socotrad18o<br />
dongge</p>
</blockquote>
<p> <a href="http://www.climateaudit.org/wp-content/uploads/2009/03/ad500recon.txt" rel="nofollow">AD500 reconstruction</a></p>
<p>&#8212;</p>
<p><a href="http://www.climateaudit.org/wp-content/uploads/2009/03/ad600proxy.txt" rel="nofollow">AD600 proxies</a>, in the following order</p>
<blockquote><p>
fisher_1996_cgreenland<br />
nv512<br />
tiljander_2003_darksum<br />
tiljander_2003_lightsum<br />
tiljander_2003_thicknessmm<br />
tiljander_2003_xraydenseave<br />
tornetrask<br />
tan_2003_recontemp<br />
curtis_1996_d13cpyro<br />
curtis_1996_d18o<br />
burns_2003_socotrad13c<br />
burns_2003_socotrad18o<br />
dongge</p>
</blockquote>
<p> <a href="http://www.climateaudit.org/wp-content/uploads/2009/03/ad600recon.txt" rel="nofollow">AD600 reconstruction</a></p>
<p>Proxies and reconstructions are as regreclow.m writes them.</p>
]]></content:encoded>
	</item>
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		<title>By: David L. Hagen</title>
		<link>http://climateaudit.org/2009/03/18/mann-2008-replication-ii/#comment-179510</link>
		<dc:creator><![CDATA[David L. Hagen]]></dc:creator>
		<pubDate>Fri, 20 Mar 2009 13:59:15 +0000</pubDate>
		<guid isPermaLink="false">http://www.climateaudit.org/?p=5503#comment-179510</guid>
		<description><![CDATA[For Freedom of Information Act (FOIA) requests for code and data, see new guidelines by Attorney General Holder:

&lt;a href=&quot;http://www.usdoj.gov/opa/pr/2009/March/09-ag-253.html&quot; rel=&quot;nofollow&quot;&gt;Attorney General Issues New FOIA Guidelines to Favor Disclosure and Transparency&lt;/a&gt;
http://www.usdoj.gov/opa/pr/2009/March/09-ag-253.html

&lt;a href=&quot;http://www.usdoj.gov/ag/foia-memo-march2009.pdf&quot; rel=&quot;nofollow&quot;&gt;Memorandum for Heads of Executive Departments and Agencies Re The Freedom of Information Act (FOIA)&lt;/a&gt;
http://www.usdoj.gov/ag/foia-memo-march2009.pdf

--]]></description>
		<content:encoded><![CDATA[<p>For Freedom of Information Act (FOIA) requests for code and data, see new guidelines by Attorney General Holder:</p>
<p><a href="http://www.usdoj.gov/opa/pr/2009/March/09-ag-253.html" rel="nofollow">Attorney General Issues New FOIA Guidelines to Favor Disclosure and Transparency</a><br />
<a href="http://www.usdoj.gov/opa/pr/2009/March/09-ag-253.html" rel="nofollow">http://www.usdoj.gov/opa/pr/2009/March/09-ag-253.html</a></p>
<p><a href="http://www.usdoj.gov/ag/foia-memo-march2009.pdf" rel="nofollow">Memorandum for Heads of Executive Departments and Agencies Re The Freedom of Information Act (FOIA)</a><br />
<a href="http://www.usdoj.gov/ag/foia-memo-march2009.pdf" rel="nofollow">http://www.usdoj.gov/ag/foia-memo-march2009.pdf</a></p>
<p>&#8211;</p>
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		<title>By: andy</title>
		<link>http://climateaudit.org/2009/03/18/mann-2008-replication-ii/#comment-179509</link>
		<dc:creator><![CDATA[andy]]></dc:creator>
		<pubDate>Fri, 20 Mar 2009 11:35:44 +0000</pubDate>
		<guid isPermaLink="false">http://www.climateaudit.org/?p=5503#comment-179509</guid>
		<description><![CDATA[Thanks, seems that at least some Fisher series have been discussed in CA as well; http://www.climateaudit.org/?p=883]]></description>
		<content:encoded><![CDATA[<p>Thanks, seems that at least some Fisher series have been discussed in CA as well; <a href="http://www.climateaudit.org/?p=883" rel="nofollow">http://www.climateaudit.org/?p=883</a></p>
]]></content:encoded>
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		<title>By: Jean S</title>
		<link>http://climateaudit.org/2009/03/18/mann-2008-replication-ii/#comment-179508</link>
		<dc:creator><![CDATA[Jean S]]></dc:creator>
		<pubDate>Fri, 20 Mar 2009 07:56:55 +0000</pubDate>
		<guid isPermaLink="false">http://www.climateaudit.org/?p=5503#comment-179508</guid>
		<description><![CDATA[Re: &lt;a href=&quot;#comment-333626&quot; rel=&quot;nofollow&quot;&gt;andy (#15)&lt;/a&gt;,
Oh, if you meant the one with the label &quot;curtis_1996_d13cpyro&quot; (which seems to be dominant in AD600 step), that&#039;s one of Punta Laguna series (C13.P_coronatus) discussed already &lt;a href=&quot;http://www.climateaudit.org/?p=3561&quot; rel=&quot;nofollow&quot;&gt;here&lt;/a&gt; in the context of infilling.]]></description>
		<content:encoded><![CDATA[<p>Re: <a href="#comment-333626" rel="nofollow">andy (#15)</a>,<br />
Oh, if you meant the one with the label &#8220;curtis_1996_d13cpyro&#8221; (which seems to be dominant in AD600 step), that&#8217;s one of Punta Laguna series (C13.P_coronatus) discussed already <a href="http://www.climateaudit.org/?p=3561" rel="nofollow">here</a> in the context of infilling.</p>
]]></content:encoded>
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	<item>
		<title>By: Jean S</title>
		<link>http://climateaudit.org/2009/03/18/mann-2008-replication-ii/#comment-179507</link>
		<dc:creator><![CDATA[Jean S]]></dc:creator>
		<pubDate>Fri, 20 Mar 2009 07:37:15 +0000</pubDate>
		<guid isPermaLink="false">http://www.climateaudit.org/?p=5503#comment-179507</guid>
		<description><![CDATA[Re: &lt;a href=&quot;#comment-333626&quot; rel=&quot;nofollow&quot;&gt;andy (#15)&lt;/a&gt;,
if you mean the one labeled &quot;fisher_1996_cgreenland&quot;, it is supposedly this one:
http://www.gfy.ku.dk/~www-glac/papers/abstracts/183.htm
It gets weights (AD600) &lt;strong&gt;-&lt;/strong&gt;0.2079 (for the low split; shown above) and  &lt;strong&gt;-&lt;/strong&gt;0.1775 (for the high split). It is given ID 8000, which means that in order to pass the screening, it should have &lt;em&gt;positive&lt;/em&gt; (pick-two) correlation with the local temperature. Indeed, it has, according to &lt;a href=&quot;http://www.meteo.psu.edu/~mann/supplements/MultiproxyMeans07/1209proxynames.xls&quot; rel=&quot;nofollow&quot;&gt;this file&lt;/a&gt; the reported (pick-two) correlations are
full screening: 0.3311
late: 0.3742
early: 0.4976

This amazing change between AD500 and AD600 (compare the lower right corners in UC&#039;s update figures) in the reconstruction due to adding a single series is also clearly visible in the final reconstruction (see the second figure in this post). I guess this is what they mean by &quot;robust&quot;. ;)

Notice also that there are FOUR Tiljander series (one switching sign between AD500 and AD600) out of total 12/13 proxies. I guess it must be &quot;bizarre&quot; to wonder how &quot;robust&quot; the reconstruction is for removing those series... ;)]]></description>
		<content:encoded><![CDATA[<p>Re: <a href="#comment-333626" rel="nofollow">andy (#15)</a>,<br />
if you mean the one labeled &#8220;fisher_1996_cgreenland&#8221;, it is supposedly this one:<br />
<a href="http://www.gfy.ku.dk/~www-glac/papers/abstracts/183.htm" rel="nofollow">http://www.gfy.ku.dk/~www-glac/papers/abstracts/183.htm</a><br />
It gets weights (AD600) <strong>-</strong>0.2079 (for the low split; shown above) and  <strong>-</strong>0.1775 (for the high split). It is given ID 8000, which means that in order to pass the screening, it should have <em>positive</em> (pick-two) correlation with the local temperature. Indeed, it has, according to <a href="http://www.meteo.psu.edu/~mann/supplements/MultiproxyMeans07/1209proxynames.xls" rel="nofollow">this file</a> the reported (pick-two) correlations are<br />
full screening: 0.3311<br />
late: 0.3742<br />
early: 0.4976</p>
<p>This amazing change between AD500 and AD600 (compare the lower right corners in UC&#8217;s update figures) in the reconstruction due to adding a single series is also clearly visible in the final reconstruction (see the second figure in this post). I guess this is what they mean by &#8220;robust&#8221;. <img src='http://s1.wp.com/wp-includes/images/smilies/icon_wink.gif' alt=';)' class='wp-smiley' /> </p>
<p>Notice also that there are FOUR Tiljander series (one switching sign between AD500 and AD600) out of total 12/13 proxies. I guess it must be &#8220;bizarre&#8221; to wonder how &#8220;robust&#8221; the reconstruction is for removing those series&#8230; <img src='http://s1.wp.com/wp-includes/images/smilies/icon_wink.gif' alt=';)' class='wp-smiley' /> </p>
]]></content:encoded>
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	<item>
		<title>By: andy</title>
		<link>http://climateaudit.org/2009/03/18/mann-2008-replication-ii/#comment-179506</link>
		<dc:creator><![CDATA[andy]]></dc:creator>
		<pubDate>Fri, 20 Mar 2009 05:50:16 +0000</pubDate>
		<guid isPermaLink="false">http://www.climateaudit.org/?p=5503#comment-179506</guid>
		<description><![CDATA[Which proxy is this, AD600 step-in, with all upsidedown side effects?]]></description>
		<content:encoded><![CDATA[<p>Which proxy is this, AD600 step-in, with all upsidedown side effects?</p>
]]></content:encoded>
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		<title>By: Mark T</title>
		<link>http://climateaudit.org/2009/03/18/mann-2008-replication-ii/#comment-179505</link>
		<dc:creator><![CDATA[Mark T]]></dc:creator>
		<pubDate>Fri, 20 Mar 2009 04:33:03 +0000</pubDate>
		<guid isPermaLink="false">http://www.climateaudit.org/?p=5503#comment-179505</guid>
		<description><![CDATA[Re: &lt;a href=&quot;#comment-333585&quot; rel=&quot;nofollow&quot;&gt;JohnT (#12)&lt;/a&gt;,
&lt;blockquote&gt;&quot;Yep, Mann is wrong. How could he have made such a huge mistake. Seems like he is losing his MoJo&quot;&lt;/blockquote&gt;
Given that this started with Mann&#039;s very first (or nearly) paper, I&#039;m guessing none can really say he&#039;s &quot;losing&quot; anything.  Of course, this also assumes said peers understand the distinctions as well as Jean S or UC themselves.

&lt;blockquote&gt;Are thoughts like this being circulated in the climate community?&lt;/blockquote&gt;
Not openly, at least, when was the last time you heard a headline in the MSM stating &quot;statistical conclusions are shown to be unsupported in XXX09&quot; or similar?

Mark]]></description>
		<content:encoded><![CDATA[<p>Re: <a href="#comment-333585" rel="nofollow">JohnT (#12)</a>,</p>
<blockquote><p>&#8220;Yep, Mann is wrong. How could he have made such a huge mistake. Seems like he is losing his MoJo&#8221;</p></blockquote>
<p>Given that this started with Mann&#8217;s very first (or nearly) paper, I&#8217;m guessing none can really say he&#8217;s &#8220;losing&#8221; anything.  Of course, this also assumes said peers understand the distinctions as well as Jean S or UC themselves.</p>
<blockquote><p>Are thoughts like this being circulated in the climate community?</p></blockquote>
<p>Not openly, at least, when was the last time you heard a headline in the MSM stating &#8220;statistical conclusions are shown to be unsupported in XXX09&#8243; or similar?</p>
<p>Mark</p>
]]></content:encoded>
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	<item>
		<title>By: Michael Jankowski</title>
		<link>http://climateaudit.org/2009/03/18/mann-2008-replication-ii/#comment-179504</link>
		<dc:creator><![CDATA[Michael Jankowski]]></dc:creator>
		<pubDate>Thu, 19 Mar 2009 23:24:21 +0000</pubDate>
		<guid isPermaLink="false">http://www.climateaudit.org/?p=5503#comment-179504</guid>
		<description><![CDATA[Re: &lt;a href=&quot;#comment-333585&quot; rel=&quot;nofollow&quot;&gt;JohnT (#12)&lt;/a&gt;, it seems as if their heads are in the sand.  He&#039;s only one of many climate scientists who do not get statisticians involved in publications that are heavily dependent on statistical methods.]]></description>
		<content:encoded><![CDATA[<p>Re: <a href="#comment-333585" rel="nofollow">JohnT (#12)</a>, it seems as if their heads are in the sand.  He&#8217;s only one of many climate scientists who do not get statisticians involved in publications that are heavily dependent on statistical methods.</p>
]]></content:encoded>
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	<item>
		<title>By: JohnT</title>
		<link>http://climateaudit.org/2009/03/18/mann-2008-replication-ii/#comment-179503</link>
		<dc:creator><![CDATA[JohnT]]></dc:creator>
		<pubDate>Thu, 19 Mar 2009 23:05:22 +0000</pubDate>
		<guid isPermaLink="false">http://www.climateaudit.org/?p=5503#comment-179503</guid>
		<description><![CDATA[I wonder how many of Mann&#039;s peers secretly read CA, and look at threads like this and say &quot;Yep, Mann is wrong.  How could he have made such a huge mistake.  Seems like he is losing his MoJo&quot;.

Mann&#039;s statistical skills appear to be &quot;nonrobust&quot; compared to JeanS&#039;s.

Are thoughts like this being circulated in the climate community?]]></description>
		<content:encoded><![CDATA[<p>I wonder how many of Mann&#8217;s peers secretly read CA, and look at threads like this and say &#8220;Yep, Mann is wrong.  How could he have made such a huge mistake.  Seems like he is losing his MoJo&#8221;.</p>
<p>Mann&#8217;s statistical skills appear to be &#8220;nonrobust&#8221; compared to JeanS&#8217;s.</p>
<p>Are thoughts like this being circulated in the climate community?</p>
]]></content:encoded>
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